中科智汇工场科创大数据平台

陈之端

中国科学院植物研究所

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陈之端

中国科学院植物研究所

浏览次数

644

收藏次数

接洽次数

姓名: 陈之端
职务:
职称: 研究员
通讯地址:

陈之端，男，博士，研究员，博士生导师。

1964年5月5日生，1985年毕业于山东大学生物系。1992年在中国科学院植物研究所获博士学位，并留所工作，先后任研究实习员、助理研究员、副研究员，1997年起任研究员，1999年起任博士生导师。1995、1999、2000、2002和2006年曾分别在美国佛罗里达大学、瑞士苏黎世大学、英国邱园、美国哈佛大学和美国华盛顿史密森研究所进行合作研究。

近年来一直从事植物系统发育重建和生物地理学研究，即利用多学科的手段，在较高分类阶元上，探讨植物的系统发育关系和进化，并将形态学、古植物学、分子系统学以及生物地理学的研究结果相结合，研究植物类群的起源、分化和现代地理格局及其成因。目前的主要研究工作集中在：

（1）利用基因、基因组、形态学以及生物地理学等证据探讨被子植物大类群的系统发育和进化；

（2）利用生命之树，研究植物区系及其生物多样性的时空格局和形成原因。

曾主持完成过国家自然科学基金委青年基金和美国国家地理学会（NGF）基金项目各1项，国家自然科学基金委面上项目4项，中国科学院知识创新方向性项目1项，还分别与路安民研究员和吴征镒院士共同主持过国家自然科学基金委重点项目各1项，作为合作者完成1项国家自然科学基金委海外青年学者合作研究基金项目。作为课题负责人在研科技部国家重大科学研究计划项目（973）、中国科学院海外科教基地建设计划项目和国家自然科学基金委重大项目各1项。2005年获云南省自然科学一等奖1项（本人排名第二）。在AJB、IJPS、MBE、MPE、Nature、NP、PNAS、PPEES、Taxon等国际学术刊物（SCI收录期刊）上单独或合作发表论文近百篇。

主持和参加的科研项目

2016.1-2020.12国家自然科学基金委重大项目(31590822). 中国-喜马拉雅植物区系分化中心的形成和散布机制。第二课题负责人（项目主持人：孙航研究员）。

2013.1-2015.12中国科学院海外科教基地建设计划项目（SAJC201315）, 热带东非被子植物属的生命之树重建和适应性进化研究，课题负责人（项目主持人：武汉植物园王青锋研究员）。

2014.1-2018.12科技部国家重大科学研究计划项目（2014CB954100），西南山地典型生态系统植物多样性对气候变化的响应，第一课题负责人（项目主持人：李德铢研究员）。

2013.1-2015.12中国科学院海外科教基地建设计划项目（SAJC201315）, 肯尼亚被子植物属的生命之树构建，课题负责人（项目主持人：武汉植物园王青锋研究员）。

2012.1-2016.12国家高技术研究发展计划 (863 计划) 资助项目目(2012AA021602)，珍稀物种资源样品采集与鉴定研究，子课题负责人（项目主持人：中国医学科学院药用植物研究所陈士林和宋经元研究员）。

2012.1-2016.12国家自然科学基金委面上项目(31270268)，蔷薇类COM分支的系统发育研究，主持人。

2009.1-2011.12 中国科学院大工程装置依托项目(2009-LSF-GBOWS-01)，中国种子DNA条形码，参加者(项目主持人：李德铢研究员)。

2009.1-2012.12 国家自然科学基金委重点项目(40830209)，生命之树共生固氮支系重要类群的起源、分化和环境制约，子课题负责人 (项目主持人：李德铢研究员)。

2007.1-2011.12 科技部国家重点基础研究发展计划项目(973 Program no. 2007CB411600)，中国-喜马拉雅地区生物多样性演变和保护研究，第一课题子课题负责人(项目主持人：张亚平院士; 第一课题负责人：李德铢研究员)。

2007.1-2010.12 中国科学院知识创新方向性项目(KSCX2-YW-R-136)，动植物若干类群的系统发育和分子进化，主持人。

2006.1-2009.12 国家自然科学基金委重点项目(30530090)，基部真双子叶植物中A、B、C和E类MADS-box基因的进化，子课题负责人(项目主持人：孔宏智研究员)。

2004.1-2006.12 国家自然科学基金委面上项目(30370094)，桤木属的系统学和分子生物地理学研究，主持人。

2003.1-2005.12 国家自然科学基金委海外青年学者合作研究基金项目(30228004)，陆地植物的分子系统发育和进化，国内合作者(主持人：美国密西根大学仇寅龙教授)。

2000.1-2003.12 国家自然科学基金委重点项目(39930020)，东亚植物区系中主要特征成分和重要类群的形成和发展，第二主持人(第一主持人：吴征镒院士)。

2001.1-2005.12 中国科学院知识创新工程信息化建设专项(INF105-SDB-09)，中国植物数据库和图像库，主持人。

2000.1-2002.12 国家自然科学基金委面上项目(39970057)，高等金缕梅类植物的分子系统发育，主持人。

1997.1-2000.12国家自然科学基金委重点项目(39630030)，原始被子植物的结构、分化和演化，第二主持人(第一主持人：路安民研究员)。

1996.1-1998.12 国家自然科学基金委面上项目(39670056)，桦木科植物的分子系统学研究，主持人。

1995-1996 美国地理学会项目USA National Geographic Society Grant (No. 5523-95)，三峡库区植物调查和生物多样性研究(Botanical inventory and biodiversity along the Three Gorges, Yangtze River, China)，主持人。

1996.1-2000.12 中国科学院高技术研究与发展重点项目(SDB95-06)，中国植物数据库，主持人。

1993.1-1995.12 国家自然科学基金委青年基金项目(39200009)，桦木科植物的起源和分化，主持人。

国际合作

2014.1-2018.12国家自然科学基金委中美生物多样性Three Dimensions国际合作项目（31461123001），东亚-北美间断分布森林群落生物多样性形成的地史制约、局域适应和种间互作研究。参加者（项目主持人为傅承新教授和Pamela S. Soltis教授）。

2013.9-2016.9中国科学院国际合作局对外合作重点项目（GJH Z201321），印度尼西亚热带植物分类调查与生命之树重建，子课题负责人（项目主持人：张宪春研究员）。

2013.9-2014.5 中国科学院发展中国家访问学者计划(2013FFSA0004),被子植物蔷薇类（rodids）的系统发育研究（国外合作者：科哈特科技大学Rehan Naeem博士； Kohat University of Science andTechnology)。

2011中国科学院外国专家特聘研究员计划项目（2011T1S24），分子系统学和进化遗传学，国内合作者 (国外合作者Douglas E. Soltis教授)。

2010.1-2013.12 国家自然科学基金委海峡两岸合作项目(31061160184)，东喜马拉雅-横断山与台湾种子植物区系的联系与进化机制研究，参加者(项目大陆方主持人：孙航研究员，其他参加者：周浙昆研究员、沈泽昊教授和廖文波教授)；台方李国鼎基金会匹配项目：台湾与东喜马拉雅-横断山间断分布之维管束植物系统分类与亲缘关系研究（台方主持人：彭镜毅研究员，参加者：钟国芳教授、邱文良研究员和钟诗文研究员）。

2006-2010 美国科学基金会（NSF） COLLABORATIVE RESEARCH 项目“Atol:Resolving the Trunk of the Angiosperm Tree and Twelve of its Thorniest Branches”的国际合作者。该项目主持人是Douglas Soltis，其他主要参加者包括Reed Beeman, Nico Cellinese, Chuck Davis, Michael Donoghue, Khidir Hilu, Walt Judd, Steve Manchester, Yin-Long Qiu, Mike Sanderson, Ken Sytsma, Pamela Soltis, Ken Wurdack。我们研究组参加“用线粒体基因研究蔷薇类的系统发育”。

2007.7-9中国科学院-美国密苏里植物园合作项目：Flora of China-Vitaceae，revision of Parthenocissus。在法国自然历史博物馆，英国邱园和爱丁堡植物园，荷兰莱顿标本馆和俄罗斯圣彼得堡卡马洛夫植物研究所访问研究。

2001-2006 美国科学基金会（NSF）Research Coordination Network (RCN) 项目“Deep Time: A Comprehensive Phylogenetic Tree of Living and Fossil Angiosperms”的国际合作者。该项目由Douglas Soltis, Pamela Soltis, Patric Herendeen和David Dilcher主持。其他主要参加者为：Mark Chase, Ray Christopher, Peter Crane, James Doyle, Peter Endress, Sara Hoot, Walter Judd, Richard Lupia, Susana Magallon Puebla, Steven Manchester, Yin-Long Qiu, Michael Sanderson, Youngbae Suh, Ge Sun, David Taylor。我们研究组参加“壳斗目（Fagales）形态、化石和DNA序列证据整合研究”。

研究论文（注*为通讯作者）

2018

Lu LM§, Mao LF§, Yang T§, Ye JF§, Liu B§, Li HL§, Sun M§, Miller JT, Mathews S, Hu HH, Niu YT, Peng DX, Chen YH, Smith SA, Chen M, Xiang KL, Le CT, Dang VC, Lu AM, Soltis PS*, Soltis DE*, Li JH*, Chen ZD*. 2018. Evolutionary history of the angiosperm flora of China. Nature, 554: 234-238.（§为共同第一作者）

Lu LM, Cox JC, Mathews S, Wang W, Wen J*, Chen ZD*. 2018. Optimal data partitioning, multispecies coalescent and Bayesian concordance analyses resolve early divergences of the grape family (Vitaceae). Cladistics, 34: 57-77.

Liu B§, Le CT§, Barrett RL, Nickrent DL, Chen ZD, Lu LM*, Vidal-Russell R*. 2018. Historical biogeography of Loranthaceae (Santalales): Diversification agrees with emergence of tropical forests and radiation of songbirds. Mol. Phylogenet. Evol., 124: 199-212. （§为共同第一作者）

2017

Wang Wei, Ortiz RDC, Jacques FMB, Chung Shih-Wen, Liu Yang, Xiang Xiaoguo, Chen Zhiduan. 2017. New insights into the phylogeny of Burasaieae (Menispermaceae) withthe recognition of a new genus and emphasis on the southern Taiwanese and MainlandChinese disjunction. Molecular Phylogenetics and Evolution 109: 11-20

Lu Limin, Cymon JC, Mathews S, Wang Wei, Wen Jun*, Chen Zhiduan*. 2017. Optimal data partitioning, multispecies coalescent, and Bayesian concordance analyses resolve early divergences of the grape family (Vitaceae). Cladistics 1–21. doi: 10.1111/cla.12191

Ortiz RDC, Wang Wei, Jacques FMB, Chen Zhiduan. 2017. Phylogeny and a revised tribal classification of Menispermaceae (moonseed family) based on molecular and morphological data. Taxon (in press)

彭丹晓，鲁丽敏，陈之端. 2017. 区域生命之树及其在植物区系研究中的应用. 生物多样性25 (2): 156-162

2016

Chen Zhiduan, Lu Anming, Zhang Shouzhou, Wang Qingfeng, Liu Zhongjian, Li Dezhu, Ma Hong, Li Jianhua, Soltis DE, Soltis PS, Wen Jun, China Phylogeny Consortium. 2016. The tree of life: China project. Journal of Systematicsand Evolution 54(4): 273-276

Chen Zhiduan, Yang Tuo, Lin Li, Lu Limin, Li Honglei, Sun Miao, Liu Bing, Chen Min, Niu Yanting, Ye Jianfei, Cao Zhiyong, Liu Hongmei, Wang Xiaoming, Wang Wei, ZhangJingbo, Meng Zhen, Cao Wei, Li Jianhui, Wu Shengdan, Zhao Huiling, Liu Zhongjian, Du Zhiyuan, Wang Qingfeng, Guo Jing, Tan Xinxin, Su Junxia, Zhang Linjing, Yang Leilei, Liao Yiying, Li Minghe, Zhang Guoqiang, Chung Shih-Wen, Zhang Jian, Xiang Kunli, Li Ruiqi, Soltis DE, Soltis PS, Zhou Shiliang, Ran Jinhua, Wang Xiaoquan, Jin Xiaohua, Chen Yousheng, Gao Tiangang, Li Jianhua, Zhang Shouzhou, Lu Anming, China Phylogeny Consortium. 2016. Tree of life for the genera of Chinese vascular plants. Journal of Systematics and Evolution 54(4): 277-306

Lin Ruozhu, Li Ruiqi, Lu Anming, Zhu Junyi, Chen Zhiduan*. 2016. Comparative flower development of Juglans regia, Cyclocarya paliurus and Engelhardia spicata: Homology of floral envelopes in Juglandaceae. Botanical Journal of the Linnean Society 181: 279-293

Lu Limin, Wen Jun*, Chen Zhiduan*. 2016. Cayratia cheniana (Vitaceae): An endangered new species endemic to the limestone mountains of Ninh Thuan province, Vietnam. Systematic Botany 41(1): 49–55 DOI 10.1600/036364416X690741

Wang Wei, Lin Li, Xiang Xiaoguo, Ortiz RC, Liu Yang, Xiang Kunli, Wu Shengdan, Xing Yaowu, Chen Zhi-Duan. 2016. The rise of angiosperm-dominated herbaceous floras: Insights from Ranunculaceae. Science Reports 6: 27259; doi: 10.1038/srep27259

Dang Viet Cuong, Lu Limin, Nguyen Van Hieu, Sadaf Habib, Barrett RL, Chen Zhi-Duan. 2016. A new record of the genus Yua (Vitaceae) from Vietnam. Phytotaxa 255(3): 274-280

Sun Miao, Naeem R, Su Junxia, Cao Zhiyong, Burleigh JG, Soltis PS, Soltis DE, ChenZhiduan*. 2016. Phylogeny of the Rosidae: A dense taxon sampling analysis.Journal of Systematics and Evolution 54(4): 363-391

Li Honglei, Wang Wei, Li Ruiqi, Zhang Jingbo, Sun M, Naeem R, Su Junxia, Xiang Xiaoguo, Mortimer PE, Li Dezhu, Hyde KD, Xu Jianchu, Soltis DE, Soltis PS, Li Jianhua, Zhang Shouzhou, Wu Hong, Chen Zhiduan*, Lu Anming*. 2016. Global versus Chinese perspectives on the phylogeny of the N-fixing clade.Journal of Systematics and Evolution 54(4): 392-399

Wang Wei, Dilcher DL, Sun Ge, Wang Hongshan, Chen Zhiduan.2016. Accelerated evolutionof early angiosperms: Evidence from ranunculalean phylogeny by integrating living and fossil data.Journal of Systematics and Evolution 54(4): 336-341

Yang Leilei, Li Honglei, Wei Lei, Yang Tuo, Kuang Daiyuan, Li Minghong, Liao Yiying, Chen Zhiduan, Wu Hong, Zhang Shouzhou. 2016. A supermatrix approach provides a comprehensive genus-level phylogeny for Gentianales.Journal of Systematics and Evolution 54(4): 400-415.

Xiang Kunli, Wu Shengdan,Yu Shengxiang, Liu Yang, Jabbour Florian, Erst Andrey, Zhao Liang, Wang Wei, Chen Zhi-Duan. 2016. The first comprehensive phylogeny of Coptis (Ranunculaceae) and its implications for character evolution and classification.PLoS ONE 11(4): e0153127

鲁丽敏，陈之端，路安民. 2016. 系统生物学家最终能得到完全一致的生命之树吗？科学通报 61（9）：958-963.

2015

Sun Miao, Soltis DE*, Soltis PS, Zhu Xinyu, Burleigh JG, Chen Zhiduan*. 2015. Deep phylogenetic incongruence in the angiosperm clade Rosidae. Molecular Phylogenetics and Evolution83: 156–166

Zhang Jian, ChenMin, DongXiaoyu, LinRuozhu, FanJianhua, Chen Zhiduan*. 2015.Evaluation of four commonly used DNA barcoding loci for Chinese medicinal plants of the family Schisandraceae.PLoS ONE 05/2015; 10(5): e0125574

Li Honglei,Wang Wei, Peter E. Mortimer, Li Ruiqi, Li Dezhu, Kevin D, Hyde, Xu Jianchu, Douglas E. Soltis, Chen Zhi-Duan*. 2015. Large-scale phylogenetic analyses reveal multiple gains of actinorhizal nitrogen-fixing symbioses in angiospermsassociated with climate change. Science Reports 5: 14023; doi: 10.1038/srep14023

Lin Li, Tang Liang, Bai Yun-Jun, Tang Zhiyao, Wang Wei, Chen Zhi-Duan. 2015. Range expansion and habitat shift triggered elevated diversification of the rice genus (Oryza, Poaceae) during the Pleistocene. BMC Evolutionary Biology15: 182

Meng Zhen, Dong Hui, Li Jianhui, Chen Zhiduan, Zhou Yuanchun, Wang X, Zhang Shouzhou. 2015. Darwintree: A molecular data analysis and application environmentfor phylogenetic study. Data Science Journal 14: 1-102014

2014

Xiang Xiaoguo, Wang Wei, Li Ruiqi, Liu Yang, Zhou Zhequn, Li Zhenyu, Chen Zhiduan*. 2014. Large-scale phylogenetic analyses reveal fagalean diversification promoted by the interplay of diaspores and environments in the Paleogene. Perspectives in Plant Ecology, Evolution and Systematics 16: 101-110

Wang Wei, Li Honglei,Xiang Xiaoguo,Chen Zhiduan. 2014. Revisiting the phylogenyof Ranunculeae: Implications for divergence time estimation and historical biogeography, Journal of Systematics and Evolution 52(5): 551-565

Wang Wei, Li Honglei, Chen Zhiduan. 2014. Analysis of plastid and nuclear DNAdata in plant phylogenetics-evaluation and improvement.Science China Life Sciences57(3): 280-286

LiJianhua,Jiang Jinhuo, Holly Vander Stel, Austin Homkes, Jeffrey Corajod,Kenneth Brown, ChenZhiduan. 2014. Phylogenetics and biogeography ofApios(Fabaceae) inferred from sequences of nuclear and plastid genes. International Journal of Plant Sciences175(7):764–780

Su Kunmei, Li Zhenhuan, Chen Zhiduan*2014. CsPl from the perianthless early-diverging Chloranthus spicatus shows function on petal development in Arabidopsis thaliana. Botanical Studies55: 21

Zeng Jie, Ren Bao-Qing, Zhu Jun-Yi, Chen Zhi-duan.2014.Betula hainanensis (Betulaster, Betulaceae), a new species from Hainan Island, China.Annales Botanici Fennici 51: 399-402

鲁丽敏，孙苗，张景博，李洪雷，林立，杨拓，陈闽，陈之端*. 2014. 生命之树及其应用.生物多样性22(2): 3-20

朱俊义，张力凡，沈鹏，任保青，梁宇，陈之端*. 2014. 榛属（桦木科）花序和花的形态发生.植物分类与资源学报 36(4)：433-442

朱俊义，张力凡，沈鹏，任保青，梁宇，陈之端. 2014.桦木科植物花柱适应风媒传粉的特征.植物学报 49 (5): 524-538

朱俊义，张力凡，沈鹏，任保青，梁宇，陈之端. 2014. 千金榆花序及花器官发育.植物研究 34(2):170-176

2013

Lu Limin, Wang Wei, Chen Zhiduan*, Wen Jun*, 2013. Phylogeny of the non-monophyletic Cayratia Juss. (Vitaceae) and implications for character evolution and biogeography. Molecular Phylogenetics and Evolution68: 502-515

Zhang Jingbo, Li Ruiqi, Xiang Xiaoguo, Manchester SR, Lin Li, Wang Wei, Wen Jun*, Chen Zhiduan*. 2013. Integrated fossil and molecular data reveal the biogeographic diversification of the Eastern Asian-Eastern North American disjunct hickory genus (Carya Nutt.). PLoS ONE 8(7): e70449. doi:10.1371/journal.pone.0070449

Li Honglei, Wang Wei, Lin Li, Zhu Xiangyun, Li Jianhua, Zhu Xinyu, Chen Zhiduan. 2013. Diversification of the phaseoloid legumes: Effects of climate change, range expansion and habit shift. Frontiers in Plant Science 4: 386

Wang Wei, Liu Yang, Yu Shengxiang, Gao Tiangang, Chen Zhiduan. 2013. Gymnaconitum, a new genus of Ranunculaceae endemic to the Qinghai-Tibetan Plateau. Taxon 62: 713-722

陈之端，李德铢. 2013. 生命条形码与生命之树. 植物分类与资源学报 35(6): 675-681

2012

Wang Wei, Ortiz Rosa Del C., Jacques Frédéric M.B., Xiang Xiaoguo, Li Honglei, LinLi, Li Ruiqi, Liu Yang, Soltis Pamela S., Soltis Douglas E.*, Chen Zhiduan*. 2012.Menispermaceae and the diversification of tropical rainforests near the Cretaceous-Paleogene boundary. New Phytologist195: 470-478

Hu Jin, Zhang Jian, Shan Hongyan, Chen Zhiduan*.2012. Expression of floral MADS-box genes in Sinofranchetia chinensis (Lardizabalaceae): implications for the nature of the nectar leaves. Annals of Botany 110: 57-69

Su Junxia, Wang Wei, Zhang Libing,Chen Zhiduan*. 2012.Phylogeneticplacements of two enigmaticgenera, Borthwickia and Stixis, based onmolecular and pollen data and the description of a new family of Brassicales,Borthwickiaceae. Taxon 61(3): 601-611

Dong Xiaoyu, Liu Zhong, Richard M. K. Sauders, Chen Zhiduan*. 2012. Floralontogeny of Schisandra chinensis (Schisandraceae): implications for androecial evolutionwithin Schisandra and Kadsura. Plant Systematics and Evolution 298 (4): 713-722

Lu Limin, Wen Jun*, Chen Zhiduan*. 2012. A combined morphological and molecularphylogenetic analysis of Parthenocissus (Vitaceae) and taxonomic implications.Botanical Journal of the Linnean Society 168: 43-63

陈之端, 应俊生, 路安民. 2012. 中国西南地区与台湾种子植物间断分布现象.植物学报47(6): 551–570

叶建飞, 陈之端,刘冰, 覃海宁, 杨永. 2012. 中国西南与台湾地区维管植物的间断分布格局及形成机制. 生物多样性 20(4): 482-494

2011

China Plant BOL Group, Li Dezhu, Gao Lianming, Li Hongtao, Wang Hong, Ge Xue-Jun, Liu Jianquan, Chen Zhiduan, Zhou Shiliang, Chen Shilin, Yang Junbo, Fu Chengxin, Zeng Chunxia, Yan Haifei, Zhu Yingjie, Sun Yongshuai, Chen Siyun, Zhao Lei, Wang Kun, Yang Tuo, Duan Guang-Wen. 2011. Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants.Proceedings of the National Academy of Sciences USA108 (49): 19641-19646

Jacques Frédéric M.B., Wang Wei, Ortiz Rosa Del C., Li Honglei, Zhou Zhekun, Chen Zhiduan*. 2011. Integrating fossils in a molecular-based phylogeny and testing them as calibration points for divergence time estimates in Menispermaceae. Journal of Systematics and Evolution49: 25-49

Li Dezhu, Liu Jianquan, Chen Zhiduan, Wang Hong, Ge Xuejun, Zhou ShiliangGao Lianming, Fu Chengxin, Chen Shilin. 2011.Plant DNA barcoding in China. Journal of Systematics and Evolution 49(3): 165-168

Ren Hui, Lu Limin, Soejima Akiko, Luke Quentin, Zhang Dianxiang, Chen Zhiduan, Wen Jun. 2011. Phylogenetic analysis of the grape family (Vitaceae) based on the noncoding plastid trnC-petN, trnH-psbA, and trnL-F sequences.Taxon 60(3): 629-637

Sun Ge, Dilcher D.L., Wang Hongshan, Chen Zhiduan. 2011. A eudicot from the earlyCretaceous of China.Nature471: 624-627

Zhu Xinyu, Ma Hong, Chen Zhiduan*. 2011. Phylogenetics and evolution of Su(var)3-9SET genes in land plants: rapid diversification in structure and function. BMC Evolutionary Biology11: 637

2010

Lin Ruozhu, Zeng Jie, Chen Zhiduan*.2010. Organogenesis of reproductive structuresin Betula alnoides (Betulaceae). International Journal of Plant Sciences171(6):586-594 with cover

Liu Cuijing, Zhang Jian, Zhang Ning, Shan Hongyan, Su Kunmei, Zhang Jisi, Meng Zheng, Kong Hongzhi*, Chen Zhiduan*. 2010. Interactions among proteins of floralMADS-box genes in basal Eudicots: Impications for evolution of the regulatory networkfor flower development. Molecular Biology and Evolution 27(7): 1598-1611

Nie Zelong, Sun Hang, Chen Zhiduan, Meng Ying, Manchester S.R., Wen Jun. 2010. Molecular phylogeny and Biogeographic diversification of Parthenocissus (Vitaceae) disjunct between Asia and North America. American Journal of Botany97: 1342-1353

Qiu Yinlong, Li Libo, Wang Bin, Xue Jiayu, Hendry Tory A., Li Ruiqi, Brown JosephW., Liu Yang, HudsonGeordan T., Chen Zhiduan.2010.Angiosperm phylogenyinferred from sequences of four mitochondrial genes.Journal of Systematics and Evolution48(6): 391-425

Ren Baoqing, Xiang Xiaoguo, Chen Zhiduan*.2010. Species identification of Alnus(Betulaceae) using nrDNA and cpDNA genetic markers. Molecular Ecology and Resources10(4): 594-605

Wang Wei, Hu Hao, Xiang Xiaoguo, Yu Shengxiang, Chen Zhiduan*.2010.Phylogenetic placements of Calathodes and Megaleranthis (Ranunculaceae): Evidencefrom molecular and morphological data. Taxon59(6): 1712-1720

Wang Qinghua, Jia Yu, Liu Yang, Zhiduan Chen. 2010. The systematic position of Meteoriella S. Okamura (Musci) based on molecular and morphological data. Taxon 59 (1): 93-100

任保青，陈之端*. 2010. 植物DNA条形码技术. 植物学报 45(1): 1-12

2009

Wang Wei, Lu Anming, Ren Yi, Mary E. Endress, Chen Zhiduan*. 2009. Phylogeny and classification of Ranunculales: evidence from four molecular loci and morphological data. Perspectives in Plant Ecology, Evolution and Systematics 11(2): 81-110

Manchester S.R,Chen Zhiduan Lu Anming, Uemura, K. 2009. Eastern Asian endemic seed plant genera and their paleogeographic history throughout the Northern Hemisphere. Journal of Systematics and Evolution47: 1-42

Thien L.B., Bernhardt P., Devall M. S., Chen Zhiduan, Luo Yibo, Fan Jianhua, Yuan Liangchen, Williams J. H. 2009. Pollination biology of basal angiosperms (ANITA grade). American Journalof Botany 96: 145-166

2008

Yuan Liangchen, Luo Yibo, Thien, L.B., Fan Jianhua, Xu Huanli, Yukawa, J., Chen Zhiduan*. 2008. Pollination of Kadsura longipedunculata (Schisandraceae), a monoecious basal angiosperm, by female, pollen-eating Megommata sp. (Cecidomyiidae: Diptera) in China. Biological Journal of the Linnean Society 93: 523-536

Su Kunmei, Zhao Suzhen, Shan Hongyan, Kong Hongzhi, Lu Wenliang, Günter Theissen, Chen Zhiduan*, Meng Zheng*. 2008.The MIK region rather than the C-terminal domain of AP3-like class B floral homeotic proteins determines functional specificity in the development and evolution of petals. New Phytologist 178: 544-558

Liu Yan, Jian Yu, Wang Wei, Chen Zhiduan, Davis, E. C., Qiu Yinlong. 2008. Phylogenetic relationship of two endemic genera from East Asia: Trichocoleopsis and Neotrichocolea (Hepatica). Annals of the Missouri Botanical Garden 95: 463-474

Zeng Jie, Li Jianhua, Chen Zhiduan*. 2008. A new species of Betula sect. Betulaster (Betulaceae) from China. Botanical Journal of the Linnean Society 156: 523-528

2007

Zhu Xinyu, Chase, W.C., Qiu Yinlong, Kong Hongzhi, Li Jianhua, Dilcher, D. L., Chen Zhiduan*. 2007. Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids. BMC Evolutionary Biology 7: 217

Wang Wei, Chen Zhiduan*. 2007. Generic level phylogeny of Thalictroideae (Ranunculaceae) — implications for the taxonomic status of Paropyrum and petal evolution.Taxon 56 (3): 811-821

Wang Wei, Wang Hengchang, Chen Zhiduan*. 2007. Phylogeny and morphological evolution of tribe Menispermeae (Menispermaceae) inferred from chloroplast and nuclear sequences. Perspectives in Plant Ecology, Evolution and Systematics 8: 141-154

Shan Hongyan, Zhang Ning, Liu Cuijing, Xu Guixia, Zhang Jian, Chen Zhiduan*, Kong Hongzhi*. 2007. Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes. Molecular Phylogenetics and Evolution 44：26－41

Liu Hongmei, Zhang Xianchun*, Wang Wei, Qiu Yinlong, Chen Zhiduan*.2007. Molecular phylogeny of the fern family Dryopteridaceae inferred from chloroplast rbcL and atpB genes. International Journal of Plant Sciences 168 (9): 1311-1323

Liu Hongmei, Zhang Xianchun*, Chen Zhiduan*, Dong Shiyong, Qiu Yinlong. 2007. Polyphyly of the fern family Tectariaceae sensu Ching: Insights from cpDNA sequence data. Science in China 50 (6): 789-798

Liu Hongmei, Zhang Xianchun, Chen Zhiduan, Qiu Yinlong. 2007. Inclusion of the Asiatic endemic genus Sorolepidium in Polystichum (Dryopteridaceae): evidence from the chloroplast rbcL and morphological evidence. Chinese Science Bulletin 52:631-638

Yuan Liangchen, Luo Yibo, Thien, L.B., Fan Jianhua, Xu Huanli, Chen Zhiduan. 2007. Pollination of Schisandra henryi (Schisandraceae) by female, pollen-eating Megommata species (Cecidomyiidae, Diptera) in South-central China. Annals of Botany 99: 451-460

Li Jianhua, Shoup Suzanne, Chen Zhiduan. 2007. Phylogenetic relationships of diploid species of Betula (Betulaceae) inferred from DNA sequences of nuclear nitrate reductase. Systematic Botany 32(2): 357-365

Zhang GM, Zhang XC, Chen ZD, Liu HM, Yang WL. 2007. First insights in the phylogeny of Asian cheilanthoid ferns based on sequences of two chloroplast markers. Taxon 56(2): 369–378

Qiu Yinlong, Li Libo, Wang Bin, Chen Zhiduan, Knoop, V., Groth-Malonek, M., Dombrovska, O., Lee, J., Kent, L., Rest, J., Estabrook, G.F., Hendry, T.A., Taylor, D.W., Testa, C.M., Ambros, M., Crandall-Stotler, B., Duff, R.J., Stech, M., Frey, W., Quandt, D., and Davis, C.C. 2006. The deepest divergences in land plants inferred from phylogenomic evidence. International Journal of Plant Sciences 168 (5): 691-708

Jeon, Jeong III, Chang Chin-Sung, Chen Zhiduan, 2007. Park Tae-Yoon. Systematic aspects of foliar flavonoids in subsect. Carpinus (Carpinus, Betulaceae). Biochemical Systematics and Ecology 35：606－613

Wang Wei, Chen Zhiduan, Liu Yang, Li Ruiqi, Li Jianhua. 2007. Phylogenetic and Biogeographic Diversification of Berberidaceae in the Northern Hemisphere. Systematic Botany 32 (4): 731-742

2006

Liu Zhong, Hao Gang, Luo Yibo, Thien, L.B., Rosso, S.W., Lu Anming, Chen Zhiduan*. 2006. Phylogeny and androecial evolution in Schisandraceae, inferred from sequences of nuclear ribosomal DNA ITS and chloroplast DNA trnL-F regions. International Journal of Plant Sciences 167: 539-550

Manchester, S.R., Chen Zhiduan, Zhou Zhequn 2006. Wood anatomy of Craigia (Malvales) from southeastern Yunnan, CHINA. IAWA Journal 27, 129-136

Qiu, Y.-L., Li, L., Wang, B., Chen Zhiduan, Knoop, V., Groth-Malonek, M., Dombrovska, O., Lee, J., Kent, L., Rest, J., Estabrook, G.F., Hendry, T.A., Taylor, D.W., Testa, C.M., Ambros, M., Crandall-Stotler, B., Duff, R.J., Stech, M., Frey, W., Quandt, D., and Davis, C.C. 2006. The deepest divergences in land plants inferred from phylogenomic evidence. Proceedings of the National Academy of Sciences USA 103: 15511-15516

Shan Hongyan, Su Kunmei, Lu Wenliang, Kong Hongzhi, Chen Zhiduan*, Meng Zeng*. 2006. Conservation and divergence of candidate class B genes in Akebia trifoliata (Lardizabalaceae). Development Genes and Evolution 216: 785-795

Wang Hengchang, Meng Aiping, Li Jianqiang, Feng Min, Chen Zhiduan, Wang Wei. 2006. Floral organogenesis of Cocculus Orbiculatus and Stephania Dielsiana (Menispermaceae). International Journal of Plant Sciences 167: 951-960

Wen Jun, Chen Zhiduan. 2006. Cayratia lanceolata, a new nomenclatural combination in Vitaceae from China. Acta Botanica Yunnanica 28: 471-472

Yuan Yaowu, Zhang Zhiyun, Chen Zhiduan, Olmstead, R.G. 2006. Tracking ancient polyploids: a retroposon insertion reveals an extinct diploid ancestor in the polyploid origin of Belladonna. Molecular Biology and Evolution 23: 2263-2267

Zhu Yuping, Wen Jun, Zhang Zhiyun, Chen Zhiduan. 2006. Evolutionary relationships and diversification of Stachyuraceae based on sequences of four chloroplast markers and the nuclear ribosomal ITS region. Taxon 55: 931-940

2005

Li Ruiqi, Chen Zhiduan*, Lu Anming, 2005. Organogenesis of the inflorescence and flowers in Platycarya strobilacea (Juglandaceae). International Journal of Plant Sciences 166(3) : 449-457

Yang Y, Geng Baoyin, Dilcher DL*, Chen Zhiduan*, Lott T., 2005. Morphology and affinities of an early Cretaceous Ephedra from China. American Journal of Botany 92(2): 231-242

Li Guiseng, Meng Zheng*, Kong Hongzhi, Chen Zhiduan, Lu Anmin*, 2005. Characterization of candidate class A, B and E floral homeotic genes from the perianthless basal angiosperm Chloranthus spicatus (Chloranthaceae). Development Genes and Evolution 215 (9): 437-449

Wang Wei, Li Ruiqi, Chen Zhiduan*. 2005. Systematic position of Asteropyrum (Ranunculaceae) inferred from chloroplast and nuclear sequences. Plant Systematics and Evolution 255: 41-54

Liu Yang, Jia Yu, Wang Wei, Chen Zhiduan, Qiu Yinlong, 2005. A taxonomic reassessment of Microdendron inferred from molecular and morphological evidence. The Bryologist 108 (4): 591-599

Zhang Gangmin, Zhang Xianchun, Chen Zhiduan, 2005. Phylogeny of cryptogrammoid ferns and related taxa based on rbcL sequences. Nordic Journal of Botany 23(4) : 485-493

2004

Chen Zhiduan, Li Jianhua, 2004. Phylogenetics and biogeography of Alnus (Betulaceae) inferred from sequences of nuclear ribosomal DNA ITS region. International Journal of Plant Sciences 165(2): 325-335

Li Ruiqi, Chen Zhiduan, Lu Anming, Soltis, D. E., Soltis, P. S., Manos, P. S., 2004. Phylogenetic relationships in Fagales based on DNA sequences from three genomes. International Journal of Plant Sciences 165(2): 311-324

Chen Iju, Manchester, S. R., Chen Zhiduan, 2004. Anatomically preserved seeds of Nuphar (Nymphaeaceae) from the Early Eocene of Wutu, Shandong Province, China. American Journal of Botany 91(8): 1265-1272

Xiang Qiuyun, Zhang Wenheng, Ricklefs, R. E., Qian Hong, Chen Zhiduan, Wen Jun, Li Jianhua, 2004. Regional differences in rates of plant speciation and molecular evolution: A comparison between eastern Asia and eastern North America. Evolution 2175-2184

2003

Zhang Wenheng, Chen Zhiduan*, Li Jianhua, Chen Hubiao, Tang Yancheng, 2003. Phylogeny of the Dipsacales s.l. based on chloroplast trnL-F and ndhF sequences. Molecular Phylogenetics and Evolution 26:176-189

Kang Yun, Zhang Mingli, Chen Zhiduan, 2003. A preliminary phylogenetic study of the subgenus Pogonophace (Astragalus) in China based on ITS sequence data. Acta Botanica Sinica 45(2): 140-145

Meng Shaowu, Andrew W. Douglas, Li Dezhu, Chen Zhiduan, Liang Hanxing, Yang Junbo. 2003. Phylogeny of Saururaceae based on morphology and five regions from three plant genomes. Annals of the Missouri Botanical Garden 90(4):592-602

Peng Yalin, Chen Zhiduan, Gong Xun, Zhong Yang, Shi Suhua. 2003. Phylogenetic position of Dipentodon sinicus: evidence from DNA sequences of chloroplast rbcL, nuclear ribosomal 18S, and mitochondrial matR genes. Botanical Bulletin of Academia Sinica 44: 217-222

Li Guisheng, Meng Zheng,Kong Hongzhi，Chen Zhiduan，Lu Anming , 2003. ABC model and floral evolution. Chinese Science Bulletin 48（23）：2415－2421 (in Chinese); 48 (24): 2651-2657 (in English)

Ren Hui，Pan Kaiyu，Chen Zhiduan，Wang Renqing, 2003. Structural characters of leaf epidermis and their systematic significance in Vitaceae. Acta Phytotaxonomica Sinica 41（6）： 531－544

Wang Mali, Chen Zhiduan，Zhang Xianchun，Lu Shugang,Zhao Guifang, 2003, PhylogenyoftheAthyriaceae: evidence from chloroplast trnL-F region sequences. Acta Phytotaxonomica Sinica 41（5）： 416－426

2002

Kong Hongzhi, Chen Zhiduan, Lu Anming, 2002. Phylogeny of Chloranthus (Chloranthaceae) based on nulear ribosomal ITS and plastid trnL-F sequence data. American Journal of Botany 89: 940-946

Liu Jianquan, Chen Zhiduan, Lu Anming, 2002. Molecular evidence for the sister relationship of the eastern Asia-North American intercontinental species pair in the Podophyllum group (Berberidaceae). Botanical Bulletin of Academic Sinica 43(2): 147-154

Liu Jianquan, Gao Tiangang, Chen Zhiduan, Lu Anming, 2002. Molecular phylogeny and biogeography of the Qinghai-Tibet Plateau endemic Nannoglottis (Asteraceae). Molecular Phylogenetics and Evolution 23(3): 307-325

Li Ruiqi, Chen Zhiduan*, Hong Yaping, Lu Anming, 2002. Phylogenetic relationships of the“higher” hamamelids based on chloroplast trnL-F sequences. Acta Botanica Sinica 44(12): 1462-1468

Meng Shaowu, Chen Zhiduan, Li Dezhu, Liang Hanxing, 2002. Phylogeny of Saururaceae based on mitochondrial matR gene sequence data. Journal of Plant Research 115(2): 71-76

Tang Yancheng, Lu Anming, Chen Zhiduan, Zhang Yuan, Zhang Fumin, 2002. On extant primitive angiosperms and their phytogeography. Acta Phytotaxonomica Sinica 40(3): 242-259

Wu Zhengyi, Tang Yancheng, Lu Anming, Chen Zhiduan, Li Dezhu, 2002. Synopsis of a new “polyphyletic-polychronic-polytopic” system of the angiosperms. Acta Phytotaxonomica Sinica 40(4): 289-322

2001

Chen Zhiduan, Xing Shuping, Liang Hanxing, Lu Anming, 2001. Morphogenesis of female reproductive organs of Carpinus turczaninowii and Ostryopsis davidiana (Betulaceae). Acta Botanic Sinica 43(11): 1110-1114

Meng Shaowu, Chen Zhiduan, Li Dezhu, Liang Hanxing, 2001. Phylogeny of Saururaceae inferred from matR sequence data. Acta Botanica Sinica 43(6): 653-656

Liu Jianquan, Chen Zhiduan, Lu Anming, 2001. A preliminary study of the phylogeny of the Swertiinae based on ITS data (Gentianaceae). Israel Journal of Plant Sciences 49(4)

Liu Jianquan, Chen Zhiduan, Liao Z X, Lu Anming, 2001. A comparison of ITS sequences of Tibetan medicine”Zang YIN Chen”-Swertia mussotti and its adulterant species. Acta Pharmaceutica Sinica 36(1): 67-70

2000

Liu Jianquan, Chen Zhiduan, Lu Anming, 2000. The Phylogentic relationships of an endemic genus Sinadoxa in Qinghai Xizang Platean: evidence from ITS sequences analysis. Acta Botanica Sinica 42(6): 656-658

Kong Hongzhi, Chen Zhiduan, 2000. Phylogeny in Chloranthus Swartz. (Chloranthaceae) inferred from sequence analysis of nrDNA ITS region. Acta Botanica Sinica43(7):762-764

Qiu Y L, Lee J, Bernasconi-Quadroni F, Soltis D E, Soltis P S, Zanis M, Zimmer E A, Chen Zhiduan, Savolainen V, Chase M W, 2000. Phylogeny of basal angiosperms: analysis of five genes from three genomes.International Journal of Plant Sciences 161 (6 Suppl.): S3-S27

Song Baohua, Chen Zhiduan, Wang Xiaoquan, Li Fazeng, 2000. Sequence analysis of the ITS region in Amaranthus. Acta Botanica Sinica 42(11)：1184-1189

Liu Zhong, Wang Xiaoquan, Chen Zhiduan, Lin Qi, Lu Anming, 2000. Phylogeny of Schisandraceae inferred from sequence analysis of nrDNA ITS region. Acta Botanica Sinica 42(7):758-761

1999

Chen Zhiduan, Manchester S. R., Sun Haiying, 1999. Phylogeny and evolution of the Betulaceae As inferred from DNA sequences, morphology, and paleobotany. American Journal of Botany 86(8): 1168-1181

Feng Yuxing, Chen Zhiduan, Wang Xiaoquan, Pan Kaiyu, Hong Deyuan, 1999. A taxonomical Revision of the Loropetalum-Tetrathyrium complex and its systematic position in Hamamelidoideae inferred from ITS sequences. Taxon 48:689-700

Qiu Yinlong, Lee.J.,Bernasconi-Quadron F.,Soltis D.E., Soltis P.S.,Zanis M., Chen Zhiduan, Savolainen V. ,Chase M.W., 1999. The earliest angiosperms: evidence from mitochodrial, plastid and nuclear genomes. Nature 402:404-407

1998

Chen Zhiduan, Wang Xiao-quan, Sun Hai-ying, Han Ying, Lu Anming, 1998. The systematic position of the Rhoipteleaceae: evidence from nuleotide sequences of rbcL gene. Acta Phytotaxonomica Sinica 36(1): 1-7

Manchester, S.R., Chen Zhiduan, 1998. A new genus of Coryloideae (Betulaceae) from the Paleocene of North America. International Journal of Plant Sciences 159(3): 522-532

1997

Chen Zhiduan, Lu Anming, 1997. Origin and early evolution of angiosperms: retrospect and prospects. Acta Phytotaxonomica Sinica 35(4): 375-384

Tang Yan-cheng, Lu An-ming, Chen Zhiduan, 1997. The living fossil plants-rescue, conservation and studies in urgent demand. Chinese Biodiversity 5(4): 307-308

1996

Manchester, S.R., Chen Zhiduan, 1996. Palaeocarpinus sp. nov. (Betulaceae) form the Paleocene of Wyoming, U.S.A. International Journal of Plant Sciences 157(5): 644-655

Liang Han-Xing, Pan Kai-yu, Chen Zhiduan, 1996. Floral organogenesis in Saururus chinensis (Saururaceae). Acta Phytotaxonomica Sinica 34(6): 565-568

1995

Chen Zhiduan, Zhang Zhi-yun, Lu An-ming, 1995. Solanaceae and Cucurbitaceae, in Wang Wentsai (ed.). Vascular Plants of Wulingshan Mountains. 413-416, 449-452, Beijing: Science Press

1994

Chen Zhiduan, 1994. Phylogeny and phytogeography of the Betulaceae(I). Acta Phytotaxonomica Sinica 32(1): 1-32

Chen Zhiduan, 1994. Phylogeny and phytogeography of the Betulaceae(II). Acta Phytotaxonomica Sinica 32(2): 101-153

Zhang Zhi-yun, Chen Zhiduan, 1994. Embryology of the genus Carpinus L. and its systematic significance. Cathaya 5: 59-68. (in English)

1991

Chen Zhiduan, 1991. Pollen morphology of the Betulaceae. Acta Phytotaxonomica Sinica29(6): 494-503

Chen Zhiduan, Zhang Zhi-yun, 1991: A study on foliar epidermis in the Betulaceae. Acta Phytotaxonomica Sinica29(2): 156-163

Chen Zhiduan, Lu An-ming, Pan Kai-yu, 1991. The embryology of the genus Ostryopsis (Betulaceae). Cathaya2: 53-62

1990

Chen Zhiduan, Luo Yi-bo, 1990. An investigation on forest vegetation in Tiane County of Guangxi. Plants 17(2): 18-19. +cover photo

著作专著

朱相云, 陈之端, 刘博. 2015. 中国生物物种名录. 第一卷，植物, 种子植物（IV）: 被子植物（芍药科-远志科）. 北京：科学出版社.

Chen Zhiduan, Ren Hui, Wen Jun. 2008. Leeaceae and Vitaceae. In Flora of China, Wu Zhengyi, Peter Raven (eds.). pp. Beijing: Science Press and St. Louis: Missouri Botanical Garden.

吴征镒, 汤彦承, 路安民, 陈之端, 李德铢. 2003. 中国被子植物科属综论. 科学出版社, 北京.

Lu Anming ,Zhang Zhi yun, Chen Zhiduan, Pan Kaiyu,1999. Embryology and adaptive ecology in the genus Przewalskia. In Solanaceae IV.(M.Nee,et al.eds).71-80.The Royal Botanic Gardens, Kew.

陈之端, 冯旻编译. 路安民, 葛颂, 汪小全, 孔宏智校. 1998. 植物系统学进展. 科学出版社, 北京.

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