赵屹

中国科学院计算技术研究所

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  • 赵屹
  • 研究员
简历:

2018年07月 — 今:中国科学院大学健康医疗大数据国家研究院理事长助理 2000年10月 — 今: 中国科学院计算技术研究所 助理研究员/副研究员/研究员/博导; 2013年09月 — 2016年07月:清华大学,生物信息学,博士学位 1997年09月 — 2000年07月:北京大学医学部,医学免疫学,硕士学位 1990年09月 — 1995年07月:北京中医药大学,中西医结合临床,学士学位

其他个人主页链接:http://www.bioinfo.org/zy

研究方向:
生物信息学、组学数据挖掘、人工智能+医学
社会任职:

1. 国际RNA联盟RNAcentral 专家成员 2. European Research Council 基金评审专家 3. Frontiers in genetics(影响因子4.1) Associate Editor 4. Frontiers in Plant Science(影响因子3.6) Associate Editor 5. 中国人口学会出生人口与儿童专业委员会 副主任委员 6. 中国人工智能学会生物信息学与人工生命专业委员会 委员 7. 中华医学会心血管病学分会精准心血管病学学组 委员 8. 中国卫生信息学会健康医疗大数据肿瘤专业委员会 委员 9. 国家科技信息综合利用与公共服务中心心脏外科大数据联合实验室专家委员会 委员

获奖及荣誉:

1. 中国科学院计算技术研究所2008年度 优秀员工 2. 中国科学院计算技术研究所2008年度 优秀部门 3. 中国科学院计算技术研究所2015年度 优秀员工 4. 中国科学院计算技术研究所2017年度 卓越之星

代表论著:

期刊文章: 部分论文列表 1. Hui Li, Li Xiao, Lili Zhang, Jiarui Wu, Bin Wei, Ninghui Sun? Yi Zhao? FSPP: A Tool for Genome-Wide Prediction of smORF-Encoded Peptides and Their Functions Frontiers in genetics 2018,5 2. Haitao Luo, ShuangSang Fang, Liang Sun, Zhiyong Liu, Yi Zhao? Comprehensive Characterization of the RNA Editomes in Cancer Development and Progression Frontiers in genetics 2018,1 3. ShuangSang Fang, Lili Zhang, Jincheng Guo, Yiwei Niu, Yang Wu, Hui Li,Lianhe Zhao, Xiyuan Li, XueYi Teng, Xianhui Sun, Liang Sun, Michael Q Zhang, Runsheng Chen?, Yi Zhao? NONCODEV5: a comprehensive annotation database for long non-coding RNAs. Nucleic Acids Res (2018) (Impact Factor: 11.56) 4. Shuangtao Zhao, ShuangSang Fang, Yanhua Liu, Xixi Li, Shengyou Liao, Jinwen Chen, Jingjia Liu, Lianhe Zhao, Hui Li, Wei Zhou, Wenzhi Shen, Xiaoli Dong, Rong Xiang, Luhua Wang, Yi Zhao? The long non-coding RNA NONHSAG026900 predicts prognosis as a favorable biomarker in patients with diffuse large B-cell lymphoma oncotarget 2017.01 5. Haitao Luo, Dechao Bu, Shuangsang Fang, Liang Sun, Yi Zhao? Identification and function annotation of long intervening noncoding RNAs Briefings in Bioinformatics 2016 (Impact Factor: 6.30 ) 6. Renzhi Wang, Yakun Yang, Miaomiao Sheng, Dechao Bu, Fengming Huang, Xiaohai Liu, Cuiqi Zhou, Congxin Dai, Bowen Sun, Jindong Zhu, Yi Qiao, Yong Yao, HuiJuan Zhu, Lin Lu, Yi Zhao?, Chengyu Jiang? Phenotype-Genotype Association Analysis of ACTH-Secreting Pituitary Adenoma and Its Molecular Link to Patient Osteoporosis. International journal of molecular sciences 2016.09 7. Yi Zhao, Hui Li, Michael Zhang?, RunSheng Chen? NONCODE 2016: an informative and valuable data source of long non-coding RNAs Nucleic Acids Res (2016) 44 (D1): D203-D208 (Impact Factor: 11.56 SCI citation: 131) 8. Ruoyu Miao, Haitao Luo, Huandi Zhou, Guangbing Li, Dechao Bu, Xiaobo Yang Xue Zhao, Haohai Zhang, Song Liu, Ying Zhong, Zhen Zou, Yan Zhao, Kuntao Yu, Lian He Xinting Sang, Shouxian Zhong, Jiefu Huang1, Yan Wu, Rebecca A. Miksad, Simon C. Robson Chengyu Jiang?, Yi Zhao?, Haitao Zhao? Identification of prognostic biomarkers in hepatitis B virus-related hepatocellular carcinoma and stratification by integrative multi-omics analysis Journal of Hepatology.2014.05.025 (Impact Factor: 14.9 SCI citation:54 ) 9. Xie C, Yuan J, Li H, Li M, Zhao G, Bu D, Zhu W, Wu W, Chen R?, Zhao Y?. NONCODEv4: exploring the world of long non-coding RNA genes. Nucleic Acids Research 2014 Jan;42 (Impact Factor: 11.56 SCI citation:210) 10. Xingli Guo, Lin Gao, Qi Liao, Hui Xiao, Xiaoke Ma, Xiaofei Yang, Haitao Luo, Guoguang Zhao, Dechao Bu, RunSheng Chen? and Yi Zhao? Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks Nucleic Acids Research, 2012, 1–13 doi:10.1093/nar/gks967 (Impact Factor: 11.56 SCI citation:87 ) 11. Liang Su, Haitao Luo, Dechao Bu, Guoguang Zhao, Kuntao Yu, Changhai Zhang, Yuanning Liu, RunSheng Chen and Yi Zhao? Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts Nucleic Acids Research 2013, doi:10.1093/nar/gkt646 (Impact Factor: 11.56 SCI citation: 168) 12. Dechao Bu , Kuntao Yu, Silong Sun, Chaoyong Xie, Geir Skogerb?, Ruoyu Miao, Hui Xiao, Qi Liao, Haitao Luo, Guoguang Zhao, Haitao Zhao, Zhiyong Liu, Changning Liu, Runsheng Chen? and Yi Zhao? NONCODE v3.0: Integrative annotation of long noncoding RNAs Nucleic Acids Research 2012, 40(D1): D210–D215. (Impact Factor: 11.56 SCI citation: 188) 13. Qi Liao, Hui Xiao, Ruoyu Miao, Guoguang Zhao, Haitao Luo, Dechao Bu, Haitao Zhao, Changning Liu?, Yi Zhao? ncFANs: a web server for functional annotation of long non-coding RNAs Nucleic Acids Research 2011, 39 (suppl 2): W118-W124. (Impact Factor: 11.56 SCI citation: 78) 14. Qi Liao, Changning Liu, Xiongying Yuan, Shuli Kang, Ruoyu Miao, Hui Xiao, Guoguang Zhao, Haitao Luo , Dechao Bu, Haitao Zhao, Geir Skogerb?, Zhongdao Wu? Yi Zhao? Large-scale prediction of long noncoding RNA functions in a coding-noncoding gene co-expression network Nucleic Acids Research (2011; Vol. 39, No. 9) (Impact Factor: 11.56; SCI citation: 237 ) 15. Yuan xiongyin, Yang Pengchen, Shunmin He, Changning Liu?, Yi Zhao? Clustered microRNAs' coordination in regulating protein-protein interaction network BMC system biology 2009 Vol 3, pp65 (Impact Factor:3.535; SCI citation: 62) 16. He shunming, Yang Zhen, Runsheng Chen, Haitao Zhao?, Yi Zhao? the properties and functions of virus encoded microRNA, siRNA and other small noncoding RNAs. Critical Reviews in Microbiology Volume 34, Issue 3 & 4 August 2008 (Impact Factor:5.345; SCI citation: 17) 17. Yi Zhao&, Shunmin He&, Changning Liu&, Geir Skogerb, and Runsheng Chen? microRNA regulation of messenger-like non-coding RNAs- a network of mutual microRNA control. Trends in Genetics. 2008 Jul;24(7):323-7. (Impact Factor:10.364; SCI citation:29 Featured Topic by Developmental Cell )

承担科研项目情况:

[1] 国家自然科学基金项目:基于不同测序策略的长非编码RNA拼接、鉴定算法和功能注释的系统性研究,项目负责人; [2] 国家自然科学基金项目:基于高通量测序数据的长非编码RNA调控网络及在癌症中的应用,项目负责人; [3] 科技部863项目:小核酸技术的前沿研究,项目负责人 [4] 中国科学院重点部署课题:病毒性肝炎恶性转化的多元调控网络研究,项目负责人 [5] 中国科学院计算技术研究所创新课题:后基因组时代的高通量生命多组学数据分析算法研究,项目负责人

学科类别:
计算机应用技术
所属部门:
前瞻研究实验室
专家类别:
正高
杰青入选时间:
百人入选时间:
其他备注:
博导计算机应用技术
其他备注2:
其他备注3: