张兵

中国科学院北京基因组研究所

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  • 张兵
  • 所级中心基因组测序平台主管
  • 研究员

张兵 ( ZHANG Bing )

职 称: 高级工程师
职 务: 所级中心基因组测序平台主管
E-Mail: zhangbing@big.ac.cn
学科类别: 基因组学
学习经历:
1997年9月-2001年7月 安徽大学 微生物学专业 理学学士学位 2001年9月-2006年7月 浙江大学 生物信息学专业 理学博士学位
工作经历:

2006年9月至今 中国科学院北京基因组研究所

主要研究领域:

基因组学技术和方法

承担科研项目情况:
代表论著:

1. Zhang B, Jin W, Zeng Y, Su Z, Hu S, Yu J: EST-based analysis of gene expression in the porcine brain. Genomics, proteomics & bioinformatics 2004, 2(4):237-244.

2. Zhang B, Liu Q, Yin W, Zhang X, Huang Y, Luo Y, Qiu P, Su X, Yu J, Hu S et al: Transcriptome analysis of Deinagkistrodon acutus venomous gland focusing on cellular structure and functional aspects using expressed sequence tags. BMC genomics 2006, 7:152.

3. Zheng C, Choquer M, Zhang B*, Ge H, Hu S, Ma H, Chen S: LongSAGE gene-expression profiling of Botrytis cinerea germination suppressed by resveratrol, the major grapevine phytoalexin. Fungal biology, 115(9):815-832.(co-first author)

4. Zhang Z, Zhang B*, Nie X, Liu Q, Xie F, Shang D: Transcriptome analysis and identification of genes related to immune function in skin of the Chinese brown frog. Zoological science 2009, 26(1):80-86.(co-first author)

5. P Zhou, GQ Zhang, SW Chen, ZQ Jiang, YB Tang, B Henrissat,QJ Yan, SQ Yang, CF Chen, B Zhang* and ZL Du:Genome sequence and transcriptome analyses of the thermophilic zygomycete fungus Rhizomucor miehei. BMC Genomics, 2014, 15:294.(Corresponding author)

6. Guoqiang Zhang§, Jianfeng Wang§, Jin Yang, Wenjie Li, Yutian Deng, Jing Li, Jun Huang, Songnian Hu and Bing Zhang*: Comparison and evaluation of two exome capture kits and sequencing platforms for variant calling. BMC genomics 2015,16:581. (Corresponding author)

7. Chen Y, He Y, Zhang B, Yang J, Li W, Dong Z, Hu S: Complete genome sequence of Alicyclobacillus acidocaldarius strain Tc-4-1. Journal of bacteriology, 193(19):5602-5603.

8. Gao Y, Liu H, An C, Shi Y, Liu X, Yuan W, Zhang B, Yang J, Yu C, Gao H: Arabidopsis FRS4/CPD25 and FHY3/CPD45 work cooperatively to promote the expression of the chloroplast division gene ARC5 and chloroplast division. Plant J.

9. Jin J, Zhang B, Guo H, Cui J, Jiang L, Song S, Sun M, Ren F: Mechanism analysis of acid tolerance response of bifidobacterium longum subsp. longum BBMN 68 by gene expression profile using RNA-sequencing. PloS one, 7(12):e50777.

10. Ma JY, Li M, Ge ZJ, Luo Y, Ou XH, Song S, Tian D, Yang J, Zhang B, Ou-Yang YC et al: Whole transcriptome analysis of the effects of type I diabetes on mouse oocytes. PloS one, 7(7):e41981.

11. Tao Y, Ruan J, Yeh SH, Lu X, Wang Y, Zhai W, Cai J, Ling S, Gong Q, Chong Z, Zhang B, et al: Rapid growth of a hepatocellular carcinoma and the driving mutations revealed by cell-population genetic analysis of whole-genome data. Proceedings of the National Academy of Sciences of the United States of America, 108(29):12042-12047.

12. Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S, Zeng C, Zhang B, et al: The Genomes of Oryza sativa: a history of duplications. PLoS biology 2005, 3(2):e38.

13. Haoran An, Fran?ois P. Douillard, Guohong Wang, Zhengyuan Zhai, Jin Yang, Shuhui Song, Jianyun Cui, Fazheng Ren, Yunbo Luo, Bing Zhang, Yanling Hao: Integrated transcriptomic and proteomic analysis of the bile stress response in a centenarian-originated probiotic Bifidobacterium longum BBMN68. Mol Cell Proteomics. 2014 Jun 2.

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